Ventura, M.; Holland, M. E.; Smith, M. B.; Chaparro, J. M.; Prenni, J.; Patz, J. A.; Paskewitz, S.; Weir, T. L.; Stull, V. J. “Suitability of maize crop residue fermented by Pleurotus ostreatus as feed for edible crickets: growth performance, micronutrient content, and iron bioavailability.” Frontiers in Nutrition, 2023 https://doi.org/10.3389/fnut.2023.1157811.

Hernandez-Sintharakao, M., Sarchet, C., Prenni, J., Woerner, D., Zhai, C & Nair, M. “Prediction of Tenderness, Juiciness, and Flavor Profile of 2 Beef Muscles with Different Aging Times Using Rapid Evaporative Ionization Mass Spectrometry (REIMS)” Meat and Muscle Biology, 2023 https://doi.org/10.22175/mmb.16120.

Larson, V. J.; Rico, J. L.; Wolfe, L. M.; Sharvelle, S.; Prenni, J.; De Long, S. K. Composting post-anaerobic digestion for emerging contaminant biodegradation: Impacts of operating conditions. Journal of Environmental Quality 2023, 52 (6), 1152-1165. https://doi.org/10.1002/jeq2.20515.

Hayes, C. B.; Carter, O.; MacWilliams, J. R.; Cranshaw, W.; Chaparro, J. M.; Prenni, J. E.; Nachappa, P. “Biology and management of hemp russet mite (Acari: Eriophyidae).” Journal of Economic Entomology, 2023 https://doi.org/10.1093/jee/toad137.

Seitz, V.A.; Chaparro, J.M.; Schipanski, M.E.; Wrighton, K.C.; Prenni, J.E. “Cover Crop Cultivar, Species, and Functional Diversity is Reflected in Variable Root Exudation Composition” Journal of Agricultural and Food Chemistry, 2023 https://doi.org/10.1021/acs.jafc.3c02912.

Nasiatka, K.J.; Bettenhausen, H.M.; Chaparro, J.M.; Heuberger, A.L.; Prenni, J.E. “Rapid Characterization of Hops (Humulus lupulus) Using DART-MS and Chemometrics” Journal of the American Society of Brewing Chemists, 2023 https://doi.org/10.1080/03610470.2023.2213238.

Zhai, C.; Lonergan, S.M.; Huff-Lonergan, E.J.; Johnson, L.G.; Brown, K.; Prenni, J.E.; Nair, M.N. “Lipid Peroxidation Products Influence Calpain-1 Functionality In Vitro by Covalent Binding” Journal of Agricultural and Food Chemistry, 2023 https://doi.org/10.1021/acs.jafc.3c01225.

Chaparro, J.M.; Jones, R.R.; Mitchell, S.B.; Broeckling, C.D.; Heuberger, A.L.; Shafizadeh, T.; Watkins, S.; Prenni, J.E. “Multielement Profiling of Diverse Food Samples. ACS Food Science & Technology” 2023 https://doi.org/10.1021/acsfoodscitech.2c00396.

Fromuth, K.; Chaparro, J.M.; Sedin, D.; Van Buiten, C.; Prenni, J.E. “Characterizing the Impact of Package Type on Beer Stability” ACS Food Science & Technology, 2023 https://doi.org/10.1021/acsfoodscitech.2c00351.

Ahmed, S.; Chien, C.; de la Parra, J.; German, J.; Jarvis, A.; Lal, V.; Lartey, A.; McDade, M.; Morgan, K.; Prenni, J.; Rajasekharan, M.; Shafizadeh, T.; Vázquez-Manjarrez, N.; Watkins, S. “What is in a Tomato? Mapping the Building Blocks of Food” Front. Young Minds, 2023 https://doi.org/10.3389/frym.2023.1038318.

Anthony, B.M.; Chaparro, J.M.; Prenni, J.E.; Minas, I.S. “Carbon sufficiency boosts phenylpropanoid biosynthesis early in peach fruit development priming superior fruit quality” Plant Physiology and Biochemistry, 2023 https://doi.org/10.1016/j.plaphy.2023.02.038.

Zhai, C.; Schilling, B.; Prenni, J.E.; Brooks, J.C.; Legako, J.F.; Miller, R.K.; Hernandez-Sintharakao, M.J.; Gifford, C.L.; Delmore, R.; Nair, M.N. “Evaluating the ability of rapid evaporative ionization mass spectrometry to differentiate beef palatability based on consumer preference” Journal of Food Science and Technology, 2022 https://doi.org/10.1007/s13197-022-05562-6.

Ahmed, S.; de la Parra, J.; Elouafi, I.; German, B.; Jarvis, A.; Lal, V.; Lartey, A.; Longvah, T.; Malpica, C.; Vázquez-Manjarrez, N.; Prenni, J.E; Aguilar-Salinas, C. A.; Srichamnong, W.; Rajasekharan, M.; Shafizadeh, T.; Siegel, J. B.; Steiner, R.; Tohme, J.; Watkins, S. “Foodomics: A Data-Driven Approach to Revolutionize Nutrition and Sustainable Diets” Frontiers in Nutrition, 2022 https://doi.org/10.3389/fnut.2022.874312.

Seitz, V. A.; McGivern, B. B.; Daly, R. A.; Chaparro, J. M.; Borton, M. A.; Sheflin, A. M.; Kresovich, S.; Shields, L.; Schipanski, M. E.; Wrighton, K. C.; Prenni, J.E. “Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function” Applied Environmental Microbiology, 2022 https://doi.org/10.1128/aem.00226-22.

Berry, J. C.; Qi, M.; Sonawane, B. V.; Sheflin, A.; Cousins, A.; Prenni, J.E.; Schachtman, D. P.; Liu, P.; Bart, R. S. “Increased signal-to-noise ratios within experimental field trials by regressing spatially distributed soil properties as principal components” eLife, 2022 https://doi.org/10.7554/eLife.70056.

Anthony, B.M.; Sterle, D.G.; Chaparro, J.M.; Prenni, J.E.; Minas, I.S. “Controlling for maturity reveals the direct impact of canopy position on internal fruit quality in peach” International Society for Horticultural Science (ISHS), Leuven, Belgium: pp 799-806, 2022 https://doi.org/10.17660/ActaHortic.2022.1346.102.

Yao, L.; Davidson, E.A.; Shaikh, M.W.; Forsyth, C.B.; Prenni, J.E.; Broeckling, C.D. “Quantitative analysis of short-chain fatty acids in human plasma and serum by GC-MS” Analytical and Bioanalytical Chemistry, 2022 https://doi.org/10.1007/s00216-021-03785-8.

Bowen, J.K.; Chaparro, J.M.; McCorkle, A.M.; Palumbo, E.; Prenni, J.E. “The impact of extraction protocol on the chemical profile of cannabis extracts from a single cultivar” Scientific reports 11(1), 2021 https://doi.org/10.1038/s41598-021-01378-0.

Goren, E.; Wang, C.; He, Z.; Sheflin, A.; Chiniquy, D.; Prenni, J.; Tringe, S.; Schachtman, D.; Liu, P. “Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization” BMC Bioinformatics 22(1), 2021 https://doi.org/10.1186/s12859-021-04232-2.

Anthony, B.M.; Chaparro, J.M.; Sterle, D.G.; Prenni, J.E.; Minas, I.S. “Metabolic signatures of the true physiological impact of canopy light environment on peach fruit quality” Environmental and Experimental Botany, 2021 https://doi.org/10.1016/j.envexpbot.2021.104630.

Mason, T.J.; Bettenhausen, H.M.; Chaparro, J.M.; Uchanski, M.E.; Prenni, J.E. “Evaluation of ambient mass spectrometry tools for assessing inherent postharvest pepper quality” Horticulture Research 8(160), 2021 https://doi.org/10.1038/s41438-021-00596-x.

Davis, H. E.; Budde, A.; Geornaras I.; Lindstrom V.; Chaparro J.M.; Yang, H.; Cross, H.R.; Gehring, K.B.; Belk K.E.; Engle T.E.; Prenni J.E. “Effects of dietary tallow containing trace amounts of ractopamine and the impact of withdrawal time on ractopamine residues in the gastrointestinal tract” Journal of Applied Animal Science 37(4), 2021 https://doi.org/10.15232/aas.2020-02095.

Watson, H.G.; Decloedt, A.I.; Hemeryck, L.Y.; Van Landschoot, A.; Prenni, J. “Peptidomics of an industrial gluten-free barley malt beer and its non-gluten-free counterpart: Characterization and immunogenicity.” Food Chemistry, 2021 https://doi.org/10.1016/j.foodchem.2021.129597.

Chiniquy, D.; Zhou, J.; Hartman, K.; Li, X.; Sheflin, A.; Pella, A.; Marsh, E.; Prenni, J.; Deutschbauer, A.M.; Schachtman, D.; Tringe, S.G. “Microbial community surveys of field grown sorghum reveal highly abundant Pseudomonas phylotypes in the rhizosphere” Frontiers in Microbiology, 2021 https://doi.org/10.3389/fmicb.2021.598180.

Johnson, S.A.; Prenni, J.E.; Heuberger, A.L.; Isweiri, H.; Chaparro, J.M.; Newman, S.E.; Uchanski, M.E.; Omerigic, H.M.; Michell, K.A.; Bunning, M.; Foster, M.T.; Thompson, H.J.; Weir, T.J. “Comprehensive Evaluation of Metabolites and Minerals in Six Microgreen Species and the Influence of Maturity” Current Developments in Nutrition 5(2), 2021 https://doi.org/10.1093/cdn/nzaa180.

Lind, L.; Salihovic, S.; Ganna, A.; Sundström, J.; Broeckling, C.; Magnusson, P.; Prenni, J.; Fall, T.; Ärnlöv, J.; “A multi-cohort metabolomics analysis discloses 9-decenoylcarnitine to be associate with incident atrial fibrillation”, Journal of the American Heart Association, 2021 https://doi.org/10.1161/JAHA.120.017579.

Brasier N, Widmer A, Osthoff M, Mutke M, De Ieso F, Brasier-Lutz P, Wolfe L^#, Aithal V, Broeckling CD^#, Prenni J, Eckstein J. Non-invasive Drug Monitoring of β-Lactam Antibiotics Using Sweat Analysis-A Pilot Study. Frontiers in Medicine, 2020 Aug 25;7:476. doi: 10.3389/fmed.2020.00476

Anthony, B.; Chaparro, J.^#; Prenni J.E.; Minas, I.S. “Early metabolic priming under differing carbon sufficiency conditions influences peach fruit quality development” 2020;157:416-431, Journal of Experimental Botany, doi: 10.1016/j.plaphy.2020.11.004

Brasier N.; Widmer A.; Osthoff M.; Mutke M,; Dr leso F.; Brasier-Lutz P.; Brown, K. ^#; Yao L. ^#; Broeckling C. ^#; Prenni J.E. Eckstein J. “The Detection of Vancomycin in Sweat – a Next-Generation Digital Surrogate Marker for Antibiotic Tissue Penetration – a Pilot Study”, Digital Biomarkers, 2021;5:24-28, doi: 10.1159/000512947

Davis H.E; Geornaras I.; Lindstrom V.^#; Chaparro J.M.^#; Nair M.N.; Delmore R.J; Engle T.E.; Saltman R.L.; Belk K.E.; Prenni J.E.* “Evaluation of Withdrawal Protocols on Ractopamine Residue Concentrations in Muscle, Fat, Rendered Tallow, and Large Intestine from Beef Cattle” 2020, PLOS ONE, doi:  10.1371/journal.pone.0242673

Ross, A.; Brunius, C.; Chevallier, O.; Dervilly, G.; Elliott, C.; Guitton, Y.; Prenni, J. E.; Savolainen, O.; Hemeryck, L.; Vidkjær, N. H.; et al. Making complex measurements of meat composition fast: Application of rapid evaporative ionisation mass spectrometry to measuring meat quality and fraud. Meat Science 2021, 181, 108333. DOI

Nowak C.; Salihovic S.; Broeckling C.D. ^#; Ganna A.; Prenni J.E.; Sundtrom J.; Berne C.; Lind L.; Ingelsson E.; Fall T.; Arvolv J. “Non-targeted urine metabolomics and associations with prevalent and incidence type 2 diabetes” 2020, Scientific Reports, doi:  10.1038/s41598-020-72456-y

Schinkel E R.; Nelson E.R.; Bernstein R.M.; Taylor S.N.; Hay W.W.; Brown K.^#; Prenni J.E.; Washabough J.; “Concentrating Human Milk: An Innovative point-of-care device designed to increase human milk feeding options for preterm infants” 2020, Journal of Perinatology, doi: 10.1038/s41372-020-00820-x

Catherine H Le, Lindsay G Benage, Kalyn S Specht, Lance C Li Puma, Christopher M Mulligan, Adam L. Heuberger^#, Jessica Prenni, Steven M Claypool, Kathryn C Chatfield, Genevieve C Sparagna, and Adam J. Chicco “Tafazzin deficiency impairs CoA-dependent oxidative metabolism in cardiac mitochondria” 2020, Journal of Biological Chemistry, 2020 Aug28;295(35):12485-12497, doi: 10.1074/jbc.RA119.011229

Zhai C.; Blanchefort A.D.; Brown K.^#; Prenni J.E.; Woerner D.R.; Belk K E.; Nair M.N. “Tandem mass tagged dataset used to characterize muscle-specific proteome changes in beef during early postmortem period” 2020, Data in Brief, volume 32, doi: 10.1016/j.dib.2020.106064

Michell KA; Isweiri H; Newman SE; Bunning M; Bellows LL; Dinges MM; Grabos LE; Rao S; Foster MT; Heuberger AL^#; Prenni JE; Thompson HJ; Uchanski ME; Weir TL; Johnson SA; “Microgreens: Consumer Sensory Perception and Acceptance of an Emerging Functional Food Crop” Journal of Food Science, 2020. 85(4): p. 926-935. doi:10.1111/1750-3841.15075
This article was selected for inclusion in a special competitive section of the journal “New Horizons in Food Research” which is reserved for highlighting groundbreaking articles that provide new and unique insights.

Zhai, C; Allahadjibeye D.B.; Prenni J.E.; Woerner D.R.; Belk K.E.; Nair M; “Tandem mass tag labeling to characterize muscle-specific proteome changes in beef during early postmortem period” Proteomics, 2020;Apr 21;222;103794. doi: 10.1016/j.jprot.2020.103794

Cravens E, Kirkwood J^#, Wolfe L^#, Packer R, Whalen L, Wojda S, Prenni J, Florant G, Donahue S, “The effects of neurectomy and hibernation on bone proteomics and the endocannabinoid system in marmots (Marmota flaviventris)”, Comparative Biochemistry and Physiology, Part A, 2019, Nov27;241:110621. doi: 10.1016/j.cbpa.2019.110621

Lind L.; Salihovic S.; Ganna A.; Sundstrom J.; Broeckling C.D. ^#; Magnusson P.K.; Pedersen N.L.; Siegbahn A.; Prenni J.E.; Fall T.; Ingelsson E.; Arnlov J. “A multi-cohort metabolomics analysis discloses sphingomyelin (32:1) levels to be inversely related to incident ischemic stroke” 2019 Journal of Stroke and Cerebrovascular Diseases, Dec 2:104476. doi: 10.1016/j.jstrokecerebrovasdis.2019.104476

Davis, H. E.; Badger, C-D^#; Brophy, P.^#; Geornaras, G.; Burnett, T.J.; Scanga, J.; Belk, K.; Prenni, J.E*.  “Quantification of ractopamine residues on and in beef digestive tract tissues.” Journal of Animal Science: 2019;97(10);4193-4198, doi: 10.1093/jas/skz263

Markus Stenemo; Andrea Ganna; Samira Salihovic; Christoph Nowak, Dipl.-Psych; Johan Sundström; Vilmantas Giedraitis; Corey D. Broeckling^#; Jessica E. Prenni; Per Svensson; Patrik K.E. Magnusson; Lars Lind; Erik Ingelsson; Johan Ärnlöv; Tove Fall, “The metabolites urobilin and sphingomyelin (30:1) are associated with incident heart failure in the general population” (2019) European Society of Cardiology Heart Failure Aug;6(4):764-773. doi: 10.1002/ehf2.12453.

Sheflin, A^#. M.; Kirkwood, J.S. ^#; Wolfe, L.M^#.; Jahn, C.E.; Broeckling, C.D. ^#; Schachtman, D.S.; Prenni, J.E.^* “High-throughput quantitative analysis of phytohormones in sorghum leaf and root tissue by ultra-performance liquid chromatography-mass spectrometry.” 2019, Analytical and Bioanalytical Chemistry, doi: 10.1007/s00216-019-01658-9.

Amy Sheflin^#, Dawn Chiniquy, Chaohui Yuan, Emily Goren, Indrajit Kumar, Max Braud, Thomas Brutnell, Andrea Eveland, Susannah Tringe, Peng Liu, Stephen Kresovich, Ellen Marsh, Daniel Schachtman, and Jessica Prenni* “Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for defense response” Plant Direct 2019; 3: 1– 15, doi: 10.1002/pld3.122

Gredell, D.A.; Schroeder, A.R. ^#; Belk, K.E.; Broeckling, C.D. ^#; Heuberger, A.L.^#; Kim, S-Y.; King, D.A.; Shackelford, S.D.; Sharp, J.L.; Wheeler, T.L.; Woerner, D.R.; Prenni, J.E.* “Comparison of Machine Learning Algorithms for Predictive Modeling of Beef Attributes Using Rapid Evaporative Ionization Mass Spectrometry (REIMS) Data” Scientific Reports, 2019, doi:  10.1038/s41598-019-40927-6

King, D. Andy; Shackelford, Steven; Broeckling, Corey D^#.; Prenni, Jessica E.; Belk, Keith E; Wheeler, Tommy “Metabolomic Investigation of Tenderness and Aging Response in Beef Longissimus Steaks” Meat and Muscle Biology, 2019 3(1), p.76-89, doi:10.22175/mmb2018.09.0027

Karen Rossmassler,; Sunah Kim,; Corey Broeckling, ^#; Sarah Galloway^#; Jessica Prenni,; Susan K De Long, “Impact of Primary Carbon Sources on Microbiome Shaping and Biotransformation of Pharmaceuticals and Personal Care Products” Biodegradation, 2019 Feb 28, doi: 10.1007/s10532-019-09871-0

Broeckling, Corey^#; Hoyes, Emmy; Richardson, Keith; Brown, Jeffery; Prenni, Jessica E*. “DataSet-Dependent Acquisition enables comprehensive tandem mass spectrometry coverage of complex samples.” Analytical Chemistry, 2018, Jul 3;90(13):8020-8027. doi: 10.1021/acs.analchem.8b00929

Nieto LM, Mehaffy C, Islam MN, Fitzgerald B, Belisle J, Prenni JE, Dobos KM, “Biochemical characterization of isoniazid resistant Mycobacterium tuberculosis: can the analysis of clonal strains reveal novel targetable pathways”, Molecular and Cellular Proteomics, 2018 Sep;17(9):1685-1701. doi: 10.1074/mcp.RA118.000821.

Adam J Chicco, Catherine H Le, Erich Gnaiger, Hans C Dreyer, Jonathan B Muyskens, Angelo D’Alessandro, Travis Nemkov, Austin D Hocker, Jessica E Prenni, Lisa M Wolfe^#, Nathan M Sindt^#, Andrew T Lovering, Andrew W Subudhi, Robert C Roach “Adaptive remodeling of skeletal muscle energy metabolism in high-altitude hypoxia: Lessons from AltitudeOmics” Journal of Biological Chemistry, 2018, 10.1074/jbc.RA117.000470

Mulawa EA; Kirkwood JS^#; Wolfe LM^#; Wojda SJ; Prenni JE; Florant GL; Donahue SW; Seasonal changes in endocannabinoid ligand concentrations between active and hibernating marmots (Marmota flaviventris), Journal of Biological Rhythms, 2018 Aug;33(4):388-401. doi: 10.1177/0748730418777660

Chaparro JM^#, Holm DG, Broeckling CD^#, Prenni JE, Heuberger AL^# “Metabolomics and ionomics of potato tuber reveals an influence of cultivar and market class on human nutrients and bioactive compounds” Frontiers in Nutrition, 23 May 2018, doi: 10.3389/fnut.2018.00036

Brophy P^#, Broeckling CD^#, Murphy J, Prenni JE*, “Ion-neutral clustering of bile acids in electrospray ionization across UPLC flow regimes” Journal of the American Society for Mass Spectrometry, 2018 Feb 9. doi: 10.1007/s13361-017-1878-6

Robison F^#, Turner M, Jahn C, Schwartz H, Prenni JE, Brick M, Heuberger AL^#, “Common bean varieties demonstrate differential physiological and metabolic responses to the pathogenic fungus Sclerotinia Sclerotiorum” Plant, Cell & the Environment, 2018, doi: 10.1111/pce.13176

Salihovic, Samira; Fall, Tove; Ganna, Andrea; Broeckling, Corey^#; Prenni, Jessica E.; Hyötyläinen, Tuulia; Kärrman, Anna; Lind, Monica; Ingelsson, Erik; Lind, Lars “Identification of metabolic profiles associated with human exposure to perfluoroakyl substances” Journal of Exposure Science and Environmental Epidemiology, 2018 Sep 5. doi: 10.1038/s41370-018-0060-y

Broeckling CB^#; Prenni JE* “Stacked injections of biphasic extractions for improved metabolomics coverage and sample throughput” Analytical Chemistry, 2018 Jan 16;90(2):1147-1153. doi: 10.1021/acs.analchem.7b03654

Nowak C, Trombley S, Salihovic S, Castillejo-Lopez C, Ganna A, Cook N, Broeckling CD^#, Prenni JE, Shen X, Giedraitis V, Ärnlöv J, Lind L, Berne C, Sundström J, Fall T, Ingelsson E, “Glucose challenge metabolomics implicates medium-chain acylcarnitines in insulin resistance”, Scientific Reports, 2018 Jun 6;8(1):8691. doi: 10.1038/s41598-018-26701-0

Sindt NM^#, Robison F^#, Brick MA, Schwartz HF, Heuberger AL^#, Prenni JE*, “MALDI-TOF MS with PLS modeling enables strain typing of the bacterial plant pathogen Xanthomonas axonopodis”, Journal of the American Society for Mass Spectrometry, 2017, Nov 27. doi: 10.1007/s13361-017-1839-0

Sunah Kim, Karen Rossmassler, Corey D. Broeckling^#, Sarah Galloway^#, Jessica Prenni, Susan K. De Long, “Impact of inoculum sources on biotransformation of pharmaceuticals and personal care products”, Water Research, Volume 125, 2017, Pages 227-236, ISSN 0043-1354, doi: 10.1016/j.watres.2017.08.041

Shishkova E, Kwiecien N, Hebert AS, Westphall MS, Prenni JE*, Coon JJ*, “Gender diversity in a STEM subfield – analysis of a large scientific society and its annual conferences” Journal of the American Society for Mass Spectrometry, 2017, doi: 10.1007/s13361-017-1803-z
This paper was included in Springer Natures’s Change the World, One Article at a Time initiative.  Articles were chosen by Editors-in-Chief that had an impact on society’s most pressing problems.

Jared J. Romero, Bethany E. Liebig, Corey D. Broeckling^#, Jessica E. Prenni, Thomas R. Hansen; Pregnancy-induced changes in metabolome and proteome in ovine uterine flushings, Biology of Reproduction^, Volume 97, Issue 2, 1 August 2017, Pages 273–287, doi: 10.1093/biolre/iox078

J. Charles Hoxmeier, Amy Fleshman, Corey D. Broeckling^#, Jessica E. Prenni, Lars Eisen Kenneth Gage “Metabolomics of the tick-Borrelia interaction during the nymphal tick blood meal”, Scientific Reports, 2017 doi: 10.1038/srep44394

Doherty AH, Roteliuk DM, Gookin SE, McGrew AK, Broccardo CJ^#, Condon KW, Prenni JE, Wojda SJ, Florant GL, Donahue SW. “Exploring the Bone Proteome to Help Explain Altered Bone Remodeling and Preservation of Bone Architecture and Strength in Hibernating Marmots”. Physiological and Biochemical Zoology. 2016 Sep-Oct;89(5):364-76. doi: 10.1086/687413.

Kirkwood JS^#, Broeckling CD^#, Donahue S, Prenni JE*, “A novel microflow LC-MS method for the quantitation of endocannabinoids in serum” (2016), Journal of Chromatography B, 1033-1034(15); 271-277, doi: 10.1016/j.jchromb.2016.08.035

Christoph Nowak; Samira Salihovic; Andrea Ganna; Stefan Brandmeier; Taru Tukiainen; Corey D Broeckling^#; Patrik K Magnusson; Jessica E. Prenni; Rui Wang-Sattler; Annette Peters; Konstantin Strauch; Thomas Meitinger; Vilmantas Giedraitis; Johan Ärnlöv; Christian Berne; Christian Gieger; Samuli Ripatti; Lars Lind; Nancy L Pedersen; Johan Sundström; Erik Ingelsson; Tove Fall “Effect of insulin resistance on monounsaturated fatty acid levels:  A Multi-cohort non-targeted metabolomics and mendelian randomization study”  (2016); PLOS Genetics, 2016 Oct 21;12(10):e1006379. doi: 10.1371/journal.pgen.1006379

Adewole OO, Erhabor GE, Adewole TO, Ojo AO, Harriet O, Wolfe LM^#, Prenni JE*.  Proteomic profiling of Eccrine sweat reveals its potential as a diagnostic biofluid for active tuberculosis.  Proteomics – Clinical Applications, (2016) Mar 7. doi: 10.1002/prca.201500071

Tove Fall, Samira Salihovic^, Stefan Brandmaier, Christoph Nowak, Andrea Ganna, Stefan Gustafsson, Corey D. Broeckling^#, Jessica E. Prenni, Gabi Kastenmuller, Annette Peters, Patrik K Magnusson, Rui Wang-Sattler, Vilmantas Giedraitis, Christian Gieger, Nancy Pedersen, Erik Ingelsson, Lars Lind “Non-targeted metabolomics combined with genetic analyses identifies bile acid synthesis and phospholipid metabolism to be associated with incident type 2 diabetes” (2016), Diabetologia, doi: 10.1007/s00125-016-4041-1

Broeckling, Corey D*; Ganna, Andrea; Layer, Mark; Brown, Kevin; Sutton, Ben; Ingelsson, Erik; Peers, Graham; Prenni, Jessica E* “Enabling Efficient and Confident Annotation of LC-MS Metabolomics Data through MS1 Spectrum and Time Prediction.” (2016) Analytical Chemistry, 88 (18), pp 9226–9234 10.1021/acs.analchem.6b02479

Samira Salihovic, Andrea Ganna, Tove Fall, Stefan Gustafsson, Corey D. Broeckling^#, Jessica E. Prenni, Bert van Bavel, P. Monica Lind, Erik Ingelsson, Lars Lind “The metabolic fingerprint of p, p’-DDE and HCB exposure in humans” Environment International 88 (2016) 60-65, doi: 10.1016/j.envint.2015.12.015

Marie F.S. Turner; Jay S. Kirkwood^#; Adam L. Heuberger^#; Carl Collins; Ed Wolfrum; Corey D. Broeckling^#; Jessica E. Prenni; Courtney E. Jahn “Non-targeted metabolomics in diverse sorghum breeding lines indicates primary and secondary metabolite profiles are associated with plant biomass accumulation and photosynthesis” (2016) Frontiers in Plant Science, Jul 11;7:953. doi: 10.3389/fpls.2016.00953

Adam L. Heuberger^#; Corey D Broeckling^#; Dana Sedin; Christian Holbrook; Lindsay Guerdrum; Kaylyn Kirkpatrick^#; Jessica E Prenni* “Evaluation of non-volatile metabolites in beer stored at high temperature and utility as an accelerated method to predict flavor stability” (2016) Food Chemistry, 200, 301-307, doi: 10.1016/j.foodchem.2016.01.022

Ganna A, Fall T, Salihovic S, Lee W, Broeckling CD^#, Kumar J, Hagg S, Stenemo M, Magnusson PKE, Prenni JE, Lind L, Pawitan Y, Ingelsson E “Large-scale non-targeted metabolomic profiling in three human population-based studies” Metabolomics, (2016) 12:4, doi: 10.1007/s11306-015-0893-5

Kimberly Marie Webb, Ph.D.; William M Wintermantel; Navneet Kaur; Jessica E Prenni; Carolyn J Broccardo^#; Lisa M Wolfe^#; Laura L Hladky, (2015) “Differential abundance of proteins in response to Beet necrotic yellow vein virus during compatible and incompatible interactions in sugar beet containing Rz1 or Rz2” Physiological and Molecular Plant Pathology, volume 91, pg 96-105, doi: 10.1016/j.pmpp.2015.06.006

Hoxmeier JC, Thompson BD, Broeckling CD^#, Small P, Foy BD, Prenni JE, Dobos KD. (2015) “Analysis of the metabolome of Anopheles gambiae mosquito after exposure to Mycobacterium ulcerans”. Scientific Reports, 2015;5:9242. doi: 10.1038/srep09242

Szerlong H, Herman JA, Krause CM, Deluca JG, Skoultchi A, Winger QA, Prenni JE, Hansen JC (2015) “Proteomic characterization of the nucleolar linker histone H1 interaction network” Journal of Molecular Biology, 2015 Jun 5;427(11):2056-71. doi: 10.1016/j.jmb.2015.01.001

Ganna A, Salihovic S, Sundstrom J, Broeckling CD^#, Hedman AK, Magnusson PKE, Pedersen NL, Larsson A, Siegbahn A, Zilmer M, Prenni JE, Arnlov J, Lind L, Fall T, Ingelsson E.  “Large-scale metabolomic profiling identifies novel biomarkers for incident coronary heart disease” (2014) PLOS Genetics, doi: 10.1371/journal.pgen.1004801.

Broeckling CD^#., Afsar, FA, Neumann S, Ben-Hur A., Prenni JE* “RAMClust: A Novel Feature Clustering Method Enables Spectral-Matching-Based Annotation for Metabolomics Data” (2014) Analytical Chemistry 86(14), 6812-6817, doi: 10.1021/ac501530d

Heuberger AL^#, Robison FM^#, Lyons SMA^#, Broeckling CD^# and Prenni JE* (2014) “Evaluating plant immunity using mass spectrometry-based metabolomics workflows”. Frontiers in Plant Science. 5:291. doi: 10.3389/fpls.2014.00291

Brandt LE, Ehrhart EJ, Scherman H^#, Olver CS, Bohn AA, Prenni JE* (2014) “Characterization of the canine urinary proteome” Veterinary Clinical Pathology 1-14, doi: 10.1111/vcp.12147

Henley, T., Reddivari, L., Broeckling, C.D.^#, Bunnng, M., Miller, J., Avens, J.S., Stone, M., Prenni, J.E. & Vanamala, J. (2014) “American India Pale Ale matrix rich in xanthohumol is potent in suppressing proliferation and elevating apoptosis of human colon cancer cells” International Journal of Food Science and Technology May10, doi: 10.1111/ijfs.12570

Kumar J, Karlsson R, Broeckling CD^#, Prince JA, Hong MG, Prenni JE, Ingelsson E, Wiklund F (2014) “Associations of Body Mass Index and Obesity-Related Genetic Variants with Serum Metabolites” Current Metabolomics 2(1), 27-36, doi: 10.2174/2213235X02666140214200752.

Reisdorph N, Stearman R, Kechris K, Phang TL, Reisdorph R, Prenni J, Erle DJ, Coldren C, Schey K, Nesvizhskii A, Geraci M, (2014) “Hands on Workshops as an Effective Means of Learning Advanced Technologies Including Genomics, Proteomics, and Bioinformatics” Genomics, Proteomics, and Bioinformatics,  Dec;11(6):368-77, doi: 10.1016/j.gpb.2013.10.002

Webb K, Broccardo C^#, Prenni JE, Wintermantel W. (2014) “Proteomics Profiling of Sugar Beet (Beta vulgaris) Leaves during Rhizomania Compatible Interactions” Proteomes, 2(2), 208-223, doi: 10.3390/proteomes2020208